PDF) Recentrifuge: robust comparative analysis and contamination removal for metagenomics
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples | Environmental Microbiome | Full Text
File:WGS metagenomics analysis steps.gif - Wikipedia
Genes | Free Full-Text | Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS)
Evaluating the Information Content of Shallow Shotgun Metagenomics | mSystems
Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection | Nature Biotechnology
Centrifuge - Taxonomic Classifier 1.0.3 | App Catalog | KBase
Optimization of cerebrospinal fluid microbial DNA metagenomic sequencing diagnostics | Scientific Reports
A streamlined clinical metagenomic sequencing protocol for rapid pathogen identification | Scientific Reports
Long-read metagenomics using PromethION uncovers oral bacteriophages and their interaction with host bacteria | Nature Communications
Frontiers | Metagenomic Data Assembly – The Way of Decoding Unknown Microorganisms
Real-time metagenomics-based diagnosis of community-acquired meningitis: A prospective series, southern France - eBioMedicine
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples | Environmental Microbiome | Full Text
Centrifuge: rapid and sensitive classification of metagenomic sequences | bioRxiv
Recentrifuge: Robust comparative analysis and contamination removal for metagenomics | PLOS Computational Biology
Metagenomic next-generation sequencing to identify pathogens and cancer in lung biopsy tissue - eBioMedicine
Strategies and tools in illumina and nanopore‐integrated metagenomic analysis of microbiome data - Xia - 2023 - iMeta - Wiley Online Library
Genes | Free Full-Text | Comparison of Metagenomics and Metatranscriptomics Tools: A Guide to Making the Right Choice
Recentrifuge: robust comparative analysis and contamination removal for metagenomic data | bioRxiv
Original Metagenomics WGS analysis-Centrifuge 1.0.3 sub-workflow. | Download Scientific Diagram
AMAISE: a machine learning approach to index-free sequence enrichment | Communications Biology
CosmosID-HUB: An Interactive Metagenomics Analysis Platform with Increased Accuracy and Precision at the Strain Level - CosmosID
Introduction to the principles and methods underlying the recovery of metagenome‐assembled genomes from metagenomic data - Goussarov - 2022 - MicrobiologyOpen - Wiley Online Library
